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DVU_0747 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0747" - ABC transporter, ATP-binding protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
DVU_0747ABC transporter, ATP-binding protein; Identified by similarity to OMNI-CC1598; match to protein family HMM PF00005 (212 aa)    
Predicted Functional Partners:
DVU_0746
ABC transporter, permease protein; Identified by similarity to GP-20906056; match to protein family HMM PF00528 (248 aa)
   
    0.981
DVU_0745
ABC transporter, periplasmic substrate-binding protein; Identified by similarity to GP-14330288; match to protein family HMM PF01547 (272 aa)
 
   
    0.879
DVU_0978
ABC transporter, periplasmic substrate-binding protein, putative; Identified by similarity to GP-14330288 (284 aa)
 
   
    0.843
DVU_1057
Cobalt ABC transporter, permease protein, putative; Identified by similarity to OMNI-BR1367; match to protein family HMM PF02361 (256 aa)
   
 
  0.707
fusA-2
Translation elongation factor G; Identified by similarity to SP-P13551; similar to GP-15988476; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484 (682 aa)
   
          0.667
cbiM
Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891 (204 aa)
     
 
  0.604
rpsI
30S ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family (130 aa)
 
          0.596
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (508 aa)
   
          0.595
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
 
          0.563
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
 
          0.549
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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