STRINGSTRING
DVU_0759 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0759" - Peptidase, M29 family in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0759Peptidase, M29 family; Identified by match to protein family HMM PF02073 (401 aa)    
Predicted Functional Partners:
DVU_0758
Uncharacterized protein; Identified by Glimmer2; putative (149 aa)
              0.845
DVU_1006
Uncharacterized protein; Identified by Glimmer2; putative (149 aa)
   
          0.580
DVU_0155
Identified by match to protein family HMM PF01663 (462 aa)
   
          0.566
mop
Aldehyde oxidoreductase; Identified by similarity to SP-Q46509; match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738 (906 aa)
         
  0.555
DVU_1600
Adenylate cyclase; Identified by match to protein family HMM PF01928 (203 aa)
 
          0.533
DVU_0584
Transposase, putative; Identified by similarity to OMNI-NTL01NM00438 (312 aa)
   
          0.519
DVU_0582
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (672 aa)
   
          0.475
DVU_0399
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
   
          0.468
DVU_1905
Uncharacterized protein; Identified by Glimmer2; putative (142 aa)
   
          0.446
DVU_0400
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
   
          0.437
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (18%) [HD]