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rodA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"rodA" - Peptidoglycan glycosyltransferase MrdB in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rodAPeptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (371 aa)    
Predicted Functional Partners:
DVU_0786
Penicillin-binding protein; Identified by similarity to SP-P08150; match to protein family HMM PF00905; match to protein family HMM PF03717 (595 aa)
 
  0.996
mreC
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (304 aa)
 
 
  0.992
mreB-1
Rod shape-determining protein MreB; Identified by similarity to SP-P13519; match to protein family HMM TIGR00904 (346 aa)
 
  0.990
DVU_2510
Penicillin-binding protein; Identified by similarity to SP-P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 (690 aa)
 
  0.921
DVU_0787
Uncharacterized protein; Identified by Glimmer2; putative (156 aa)
 
          0.900
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (449 aa)
   
 
  0.884
DVU_0397
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (243 aa)
 
 
  0.883
mreB-2
Rod shape-determining protein MreB; Identified by similarity to SP-P13519; match to protein family HMM TIGR00904 (340 aa)
 
 
  0.863
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring; Belongs to the FtsA/MreB family (408 aa)
   
 
  0.844
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily (417 aa)
 
 
  0.841
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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