STRINGSTRING
DVU_0792 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0792" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0792annotation not available (110 aa)    
Predicted Functional Partners:
DVU_0791
Methylated-DNA--protein-cysteine methyltransferase, DNA-binding domain protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589 (161 aa)
              0.845
DVU_2516
CBS domain protein; Identified by match to protein family HMM PF00571 (161 aa)
   
          0.726
DVU_2282
Uncharacterized protein; Identified by Glimmer2; putative (516 aa)
   
          0.688
DVU_3267
Uncharacterized protein; Identified by Glimmer2; putative (203 aa)
   
          0.667
DVU_0304
Uncharacterized protein; Identified by Glimmer2; putative (93 aa)
   
          0.644
DVU_0790
Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212 (351 aa)
              0.618
DVU_1650
Uncharacterized protein; Identified by similarity to SP-P45576 (374 aa)
   
          0.609
DVU_0425
Uncharacterized protein; Identified by Glimmer2; putative (268 aa)
   
          0.608
DVU_0584
Transposase, putative; Identified by similarity to OMNI-NTL01NM00438 (312 aa)
   
          0.587
DVU_0843
Uncharacterized protein; Identified by Glimmer2; putative (394 aa)
   
          0.578
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (9%) [HD]