STRINGSTRING
DVU_0799 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0799" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0799Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)    
Predicted Functional Partners:
DVU_0800
Uncharacterized protein; Identified by Glimmer2; putative (68 aa)
              0.845
ccmB
annotation not available (225 aa)
   
     
  0.787
DVU_1842
annotation not available (318 aa)
   
          0.784
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
   
          0.784
DVU_2071
annotation not available (318 aa)
   
          0.783
DVU_1194
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
   
          0.783
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
   
          0.783
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative (491 aa)
   
          0.781
DVU_1952
Uncharacterized protein; Identified by Glimmer2; putative (231 aa)
   
          0.780
DVU_0602
Uncharacterized protein; Identified by Glimmer2; putative (120 aa)
   
          0.780
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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