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DVU_0827 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0827" - Glycolate oxidase, subunit GlcD, putative in Desulfovibrio vulgaris Hildenborough
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Predicted Interactions
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textmining
co-expression
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DVU_0827Glycolate oxidase, subunit GlcD, putative; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913 (471 aa)    
Predicted Functional Partners:
DVU_3028
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (422 aa)
 
  0.941
DVU_1412
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family (326 aa)
   
 
  0.912
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily (729 aa)
   
 
  0.911
DVU_3121
Aminotransferase, class V; Identified by match to protein family HMM PF00266 (376 aa)
   
 
    0.905
DVU_1358
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702 (215 aa)
       
  0.901
DVU_0130
Phosphoglycolate phosphatase, putative; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 (220 aa)
       
  0.901
DVU_1783
Cysteine-rich domain protein; Identified by match to protein family HMM PF02754 (250 aa)
 
 
  0.833
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (590 aa)
         
  0.826
glcD
Glycolate oxidase, subunit GlcD; Identified by similarity to SP-P52075; match to protein family HMM PF01565; match to protein family HMM PF02913 (461 aa)
   
   
0.825
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a ’tag peptide’, a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (154 aa)
              0.823
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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