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ptsH protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"ptsH" - Phosphocarrier protein HPr in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ptsHPhosphocarrier protein HPr; Identified by similarity to SP-P07006; match to protein family HMM PF00381; match to protein family HMM TIGR01003 (86 aa)    
Predicted Functional Partners:
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (590 aa)
 
 
  0.990
DVU_0981
Multiphosphoryl transfer protein, putative; Identified by similarity to SP-P23388; match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; Belongs to the PEP-utilizing enzyme family (854 aa)
 
 
  0.933
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a ’tag peptide’, a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (154 aa)
              0.877
DVU_1630
PTS system, IIA component; Identified by match to protein family HMM PF00359 (149 aa)
 
   
  0.826
DVU_0827
Glycolate oxidase, subunit GlcD, putative; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913 (471 aa)
              0.810
DVU_0831
PTS system, IID component, putative; Identified by similarity to SP-P26382 (252 aa)
         
  0.774
DVU_1633
PTS system, IIB component; Identified by similarity to SP-P42909; match to protein family HMM PF03830 (153 aa)
 
 
  0.770
DVU_1632
PTS system, IIA component; Identified by similarity to OMNI-BR2094; match to protein family HMM PF03610 (145 aa)
 
 
  0.759
DVU_1833
Phosphoenolpyruvate synthase, putative; Identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896 (1191 aa)
   
 
  0.703
DVU_0826
Glycolate oxidase, iron-sulfur subunit, putative; Identified by similarity to SP-P52074; match to protein family HMM PF00037; match to protein family HMM PF02754 (440 aa)
              0.502
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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