STRINGSTRING
DVU_0843 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0843" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0843Uncharacterized protein; Identified by Glimmer2; putative (394 aa)    
Predicted Functional Partners:
DVU_0842
Uncharacterized protein; Identified by Glimmer2; putative (76 aa)
              0.845
DVU_1537
Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)
   
        0.769
DVU_0810
Uncharacterized protein; Identified by Glimmer2; putative (686 aa)
   
          0.740
DVU_1651
Uncharacterized protein; Identified by similarity to OMNI-NTL01SM00387 (123 aa)
 
          0.721
DVU_1176
Uncharacterized protein; Identified by Glimmer2; putative (185 aa)
   
          0.711
DVU_0797
Uncharacterized protein; Identified by similarity to GP-21899254 (476 aa)
   
          0.711
DVU_3352
annotation not available (189 aa)
   
          0.709
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.699
DVU_1039
annotation not available (213 aa)
   
          0.698
DVU_0462
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP-P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807 (391 aa)
   
   
  0.696
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (13%) [HD]