STRINGSTRING
DVU_0858 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0858" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0858annotation not available (227 aa)    
Predicted Functional Partners:
DVU_2211
Uncharacterized protein; Identified by Glimmer2; putative (872 aa)
   
 
      0.800
DVU_1955
TPR domain protein; Identified by match to protein family HMM PF00515 (277 aa)
   
 
      0.800
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515 (1076 aa)
   
 
      0.799
DVU_0005
annotation not available (261 aa)
   
 
      0.799
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515 (285 aa)
   
 
      0.797
DVU_0756
TPR domain protein; Identified by match to protein family HMM PF00515 (237 aa)
   
 
      0.790
DVU_2937
TPR domain protein/response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00515 (451 aa)
 
 
  0.789
flgM
Negative regulator of flagellin synthesis FlgM; Identified by similarity to SP-P39809; match to protein family HMM PF04316 (104 aa)
 
          0.785
DVU_3225
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.783
DVU_1843
Uncharacterized protein; Identified by Glimmer2; putative (317 aa)
   
 
      0.782
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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