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DVU_0891 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0891" - Aminotransferase in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0891Aminotransferase; Identified by match to protein family HMM PF00155 (397 aa)    
Predicted Functional Partners:
hom
Homoserine dehydrogenase; Identified by similarity to SP-P19582; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 (424 aa)
   
 
  0.984
DVU_0889
Phosphonopyruvate decarboxylase-related protein; Identified by match to protein family HMM PF01676 (379 aa)
              0.886
DVU_0462
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP-P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807 (391 aa)
 
   
  0.635
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
       
 
  0.605
aroK-1
Shikimate kinase; Identified by similarity to SP-P10880; match to protein family HMM PF01202 (175 aa)
   
        0.596
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
   
   
  0.570
map
Methionine aminopeptidase; Identified by similarity to SP-P07906; match to protein family HMM PF00557; match to protein family HMM TIGR00500 (259 aa)
         
  0.568
DVU_0893
Identified by match to protein family HMM PF00582; Belongs to the universal stress protein A family (160 aa)
   
        0.541
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
         
  0.534
mraZ
Transcriptional regulator MraZ; Identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; Belongs to the MraZ family (149 aa)
           
  0.534
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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