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pyrF protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"pyrF" - Orotidine 5'-phosphate decarboxylase in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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pyrFOrotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (235 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (186 aa)
   
 
  0.999
carB
Carbamoyl-phosphate synthase large chain; Identified by similarity to SP-P00968; match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369 (1077 aa)
   
   
  0.996
carA
Carbamoyl-phosphate synthase small chain; Identified by similarity to SP-P25993; match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368 (375 aa)
   
   
  0.994
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily (422 aa)
 
   
  0.988
pyrR
Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (178 aa)
   
 
  0.959
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (238 aa)
   
 
  0.956
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (208 aa)
   
 
  0.953
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515 (285 aa)
   
      0.948
pyrB
Aspartate carbamoyltransferase; Identified by similarity to SP-P05654; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670 (317 aa)
 
   
  0.947
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate (307 aa)
 
   
  0.939
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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