Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DVU_0912Conserved domain protein. (194 aa)    
Predicted Functional Partners:
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.955
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.955
fliM
Flagellar motor switch protein FliM; Identified by similarity to SP:P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397.
 
  
 0.954
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.954
DVU_0311
Flagellar assembly protein FliH, putative; Identified by similarity to SP:P31068.
 
    0.953
DVU_3227
Flagellar basal body-associated protein, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.951
DVU_0514
Identified by match to protein family HMM PF03240.
 
    0.950
DVU_1445
Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120.
 
  
 0.947
fliG
Flagellar motor switch protein FliG; Identified by similarity to SP:P23448; match to protein family HMM PF01706; match to protein family HMM TIGR00207.
 
  
 0.945
DVU_0913
Conserved hypothetical protein; Identified by similarity to OMNI:TM0512.
  
  
 0.943
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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