STRINGSTRING
DVU_0912 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0912" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0912annotation not available (194 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family (297 aa)
              0.886
DVU_0913
Uncharacterized protein; Identified by similarity to OMNI-TM0512 (145 aa)
 
     
  0.841
DVU_0514
Identified by match to protein family HMM PF03240 (310 aa)
 
          0.695
DVU_1458
Chemotaxis protein CheZ, putative; Identified by similarity to SP-P07800 (238 aa)
 
          0.662
DVU_3227
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis (206 aa)
 
 
  0.617
DVU_1445
Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120 (531 aa)
 
     
  0.613
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515 (1076 aa)
 
 
      0.610
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515 (285 aa)
 
 
      0.608
DVU_0756
TPR domain protein; Identified by match to protein family HMM PF00515 (237 aa)
 
 
      0.582
DVU_3225
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.580
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (25%) [HD]