STRINGSTRING
DVU_0938 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0938" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0938annotation not available (122 aa)    
Predicted Functional Partners:
DVU_2349
Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094 (855 aa)
   
 
  0.849
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (574 aa)
   
        0.837
pgm
Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132 (551 aa)
   
   
  0.811
DVU_0867
Aromatic amino acid decarboxylase, putative; Identified by similarity to GP-6900962; match to protein family HMM PF00282 (497 aa)
   
   
  0.727
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (489 aa)
 
   
  0.719
DVU_2897
MEMO1 family protein DVU_2897; Identified by similarity to SP-O67039; match to protein family HMM PF01875; Belongs to the MEMO1 family (329 aa)
     
        0.659
DVU_0937
Uncharacterized protein; Identified by Glimmer2; putative (128 aa)
              0.643
DVU_0936
Uncharacterized protein; Identified by Glimmer2; putative (124 aa)
              0.622
pncA
Pyrazinamidase/nicotinamidase; Identified by similarity to SP-P21369; match to protein family HMM PF00857 (206 aa)
   
        0.615
DVU_0033
Identified by match to protein family HMM PF00857 (204 aa)
   
        0.615
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (20%) [HD]