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DVU_0995 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0995" - Identified by match to protein family HMM PF01965 in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0995Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 (195 aa)    
Predicted Functional Partners:
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (377 aa)
   
   
  0.667
DVU_2247
Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578 (204 aa)
   
 
  0.655
sucCD
Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (709 aa)
     
      0.651
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
   
 
  0.607
DVU_0283
AhpF family protein/thioredoxin reductase; Identified by similarity to SP-P80880; match to protein family HMM PF00070; match to protein family HMM TIGR01292; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (661 aa)
   
 
  0.578
rplE
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (179 aa)
     
      0.568
DVU_3079
Identified by match to protein family HMM PF00903 (200 aa)
   
 
  0.555
DVU_0278
Glyoxalase family protein; Identified by similarity to OMNI-NTL01FN1550; match to protein family HMM PF00903 (140 aa)
   
 
  0.555
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (502 aa)
     
      0.552
DVU_2290
Hydrogenase, CooU subunit, putative; Identified by similarity to GP-1515470; match to protein family HMM PF00329 (178 aa)
     
      0.550
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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