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DVU_1003 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1003" - DnaJ domain protein in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_1003DnaJ domain protein; Identified by match to protein family HMM PF00226 (328 aa)    
Predicted Functional Partners:
DVU_1002
Conserved domain protein; Identified by match to protein family HMM PF03692 (151 aa)
              0.861
DVU_1001
Identified by match to protein family HMM PF02629 (134 aa)
              0.861
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
 
 
  0.849
grpE
Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- dependent [...] (191 aa)
   
 
  0.819
DVU_2339
annotation not available (283 aa)
   
   
  0.795
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity; Belongs to the heat shock protein 90 family (637 aa)
     
 
  0.738
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity); Belongs to the ClpA/ClpB family (865 aa)
   
 
  0.711
clpA
ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP-P15716; match to protein family HMM PF00004; match to protein family HMM PF02861 (776 aa)
   
 
  0.711
DVU_1000
Peptidase, M24 family; Identified by match to protein family HMM PF00557 (407 aa)
   
   
  0.682
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
 
  0.630
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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