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DVU_1012 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1012" - Hemolysin-type calcium-binding repeat protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1012Hemolysin-type calcium-binding repeat protein; Identified by match to protein family HMM PF00092; match to protein family HMM PF00353; match to protein family HMM TIGR01612 (3038 aa)    
Predicted Functional Partners:
DVU_1017
ABC transporter, ATP-binding protein/permease protein; Identified by similarity to OMNI-VCA1084; match to protein family HMM PF00005; match to protein family HMM PF00664 (776 aa)
 
   
  0.959
DVU_1019
Conserved domain protein; Identified by similarity to OMNI-VCA1081 (406 aa)
 
     
  0.939
DVU_1013
Type I secretion outer membrane protein, TolC family; Identified by similarity to GP-150976; match to protein family HMM PF02321; match to protein family HMM TIGR01844 (456 aa)
 
   
  0.931
DVU_1018
Type I secretion membrane fusion protein, HlyD family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843 (429 aa)
 
   
  0.903
DVU_1545
Hemolysin-type calcium-binding repeat/calx-beta domain protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF03160; match to protein family HMM TIGR01612 (2414 aa)
 
 
 
0.902
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
 
  0.868
DVU_2102
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103 (776 aa)
   
 
  0.812
DVU_1011
Uncharacterized protein; Identified by Glimmer2; putative (32 aa)
              0.774
DVU_1072
Uncharacterized protein; Identified by similarity to OMNI-BR1366 (220 aa)
   
   
  0.768
DVU_2937
TPR domain protein/response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00515 (451 aa)
   
 
  0.761
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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