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DVU_1017 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1017" - ABC transporter, ATP-binding protein/permease protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1017ABC transporter, ATP-binding protein/permease protein; Identified by similarity to OMNI-VCA1084; match to protein family HMM PF00005; match to protein family HMM PF00664 (776 aa)    
Predicted Functional Partners:
DVU_1018
Type I secretion membrane fusion protein, HlyD family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843 (429 aa)
   
  0.992
DVU_1019
Conserved domain protein; Identified by similarity to OMNI-VCA1081 (406 aa)
 
     
  0.982
DVU_1013
Type I secretion outer membrane protein, TolC family; Identified by similarity to GP-150976; match to protein family HMM PF02321; match to protein family HMM TIGR01844 (456 aa)
 
   
  0.965
DVU_1012
Hemolysin-type calcium-binding repeat protein; Identified by match to protein family HMM PF00092; match to protein family HMM PF00353; match to protein family HMM TIGR01612 (3038 aa)
 
   
  0.959
DVU_1020
HD domain/sensory box protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00229 (701 aa)
 
   
  0.935
DVU_1016
Uncharacterized protein; Identified by Glimmer2; putative (54 aa)
              0.629
DVU_1545
Hemolysin-type calcium-binding repeat/calx-beta domain protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF03160; match to protein family HMM TIGR01612 (2414 aa)
 
   
  0.566
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (208 aa)
         
  0.544
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
         
  0.533
DVU_3041
Cytochrome c553; Identified by similarity to SP-P00120; match to protein family HMM PF00034 (93 aa)
   
     
  0.484
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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