STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1034Hypothetical protein; Identified by Glimmer2; putative. (261 aa)    
Predicted Functional Partners:
DVU_1036
Membrane protein, putative.
  
    0.630
DVU_1035
Glucokinase, putative; Belongs to the bacterial glucokinase family.
       0.628
DVU_1037
Mercuric reductase, putative; Identified by similarity to SP:P16171; match to protein family HMM PF00070; match to protein family HMM PF02852.
       0.549
DVU_1033
Competence/damage-inducible protein CinA protein, truncation; Identified by similarity to SP:P46323; match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
       0.488
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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