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DVU_1045 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1045" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1045Uncharacterized protein; Identified by Glimmer2; putative (198 aa)    
Predicted Functional Partners:
ccmB
annotation not available (225 aa)
 
          0.875
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (137 aa)
 
          0.826
DVU_1194
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
 
      0.809
DVU_2763
TPR/GGDEF domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF00990; match to protein family HMM TIGR00254 (891 aa)
   
 
      0.786
DVU_3190
Uncharacterized protein; Identified by Glimmer2; putative (555 aa)
   
        0.785
DVU_1952
Uncharacterized protein; Identified by Glimmer2; putative (231 aa)
   
        0.784
DVU_0602
Uncharacterized protein; Identified by Glimmer2; putative (120 aa)
   
          0.784
DVU_1683
Uncharacterized protein; Identified by Glimmer2; putative (578 aa)
   
          0.783
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
   
          0.783
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.783
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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