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ccmC protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"ccmC" - Cytochrome c-type biogenesis protein CcmC in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ccmCCytochrome c-type biogenesis protein CcmC; Identified by similarity to SP-P33929; match to protein family HMM PF01578 (224 aa)    
Predicted Functional Partners:
ccmB
annotation not available (225 aa)
 
 
  0.997
ccmF
Cytochrome c-type biogenesis protein CcmF; Identified by match to protein family HMM PF01578 (631 aa)
 
   
  0.993
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (137 aa)
 
 
  0.984
DVU_1049
ABC transporter, ATP-binding protein; Identified by similarity to SP-P46903; match to protein family HMM PF00005 (216 aa)
 
 
    0.959
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
 
   
  0.714
DVU_1812
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (426 aa)
   
   
  0.593
DVU_1052
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595 (354 aa)
   
   
  0.520
DVU_0734
Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP-12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469 (503 aa)
   
   
  0.491
DVU_0624
Cytochrome c-type protein; Identified by similarity to SP-P33226 (159 aa)
 
   
  0.461
DVU_0625
Cytochrome c-552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family (524 aa)
 
     
  0.441
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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