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ccmF protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"ccmF" - Cytochrome c-type biogenesis protein CcmF in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
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Textmining
[Homology]
Score
ccmFCytochrome c-type biogenesis protein CcmF; Identified by match to protein family HMM PF01578 (631 aa)    
Predicted Functional Partners:
ccmB
annotation not available (225 aa)
 
   
  0.995
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (137 aa)
 
 
  0.994
ccmC
Cytochrome c-type biogenesis protein CcmC; Identified by similarity to SP-P33929; match to protein family HMM PF01578 (224 aa)
 
   
  0.993
DVU_1049
ABC transporter, ATP-binding protein; Identified by similarity to SP-P46903; match to protein family HMM PF00005 (216 aa)
 
          0.908
arsC
Arsenate reductase; Identified by similarity to SP-P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family (147 aa)
           
  0.689
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
 
          0.674
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
   
   
  0.577
DVU_1052
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595 (354 aa)
              0.558
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (377 aa)
         
  0.537
DVU_1586
Thioredoxin family protein; Identified by similarity to SP-P36893 (155 aa)
   
   
  0.448
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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