| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0838 | DVU_1078 | DVU_0838 | DVU_1078 | Conserved hypothetical protein; Identified by similarity to SP:Q8XJP5. | R3H domain protein; Identified by match to protein family HMM PF01424. | 0.994 |
| DVU_0838 | DVU_3055 | DVU_0838 | DVU_3055 | Conserved hypothetical protein; Identified by similarity to SP:Q8XJP5. | Ribonuclease, Rne/Rng family; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757. | 0.897 |
| DVU_0838 | fabH | DVU_0838 | DVU_1207 | Conserved hypothetical protein; Identified by similarity to SP:Q8XJP5. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.408 |
| DVU_1076 | DVU_1078 | DVU_1076 | DVU_1078 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | R3H domain protein; Identified by match to protein family HMM PF01424. | 0.909 |
| DVU_1076 | rnpA | DVU_1076 | DVU_1075 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.996 |
| DVU_1076 | rplB | DVU_1076 | DVU_1306 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.647 |
| DVU_1076 | trmE | DVU_1076 | DVU_1079 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.631 |
| DVU_1076 | yidC | DVU_1076 | DVU_1077 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Inner membrane protein, 60 kDa; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.975 |
| DVU_1078 | DVU_0838 | DVU_1078 | DVU_0838 | R3H domain protein; Identified by match to protein family HMM PF01424. | Conserved hypothetical protein; Identified by similarity to SP:Q8XJP5. | 0.994 |
| DVU_1078 | DVU_1076 | DVU_1078 | DVU_1076 | R3H domain protein; Identified by match to protein family HMM PF01424. | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.909 |
| DVU_1078 | DVU_3055 | DVU_1078 | DVU_3055 | R3H domain protein; Identified by match to protein family HMM PF01424. | Ribonuclease, Rne/Rng family; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757. | 0.914 |
| DVU_1078 | dnaN | DVU_1078 | DVU_0002 | R3H domain protein; Identified by match to protein family HMM PF01424. | DNA polymerase III, beta subunit; Identified by match to protein family HMM PF00712; match to protein family HMM PF02768; match to protein family HMM TIGR00663. | 0.703 |
| DVU_1078 | fabH | DVU_1078 | DVU_1207 | R3H domain protein; Identified by match to protein family HMM PF01424. | 3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.781 |
| DVU_1078 | gidB | DVU_1078 | DVU_1250 | R3H domain protein; Identified by match to protein family HMM PF01424. | Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.728 |
| DVU_1078 | rnpA | DVU_1078 | DVU_1075 | R3H domain protein; Identified by match to protein family HMM PF01424. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.917 |
| DVU_1078 | rplB | DVU_1078 | DVU_1306 | R3H domain protein; Identified by match to protein family HMM PF01424. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.704 |
| DVU_1078 | trmE | DVU_1078 | DVU_1079 | R3H domain protein; Identified by match to protein family HMM PF01424. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.701 |
| DVU_1078 | yidC | DVU_1078 | DVU_1077 | R3H domain protein; Identified by match to protein family HMM PF01424. | Inner membrane protein, 60 kDa; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.957 |
| DVU_3055 | DVU_0838 | DVU_3055 | DVU_0838 | Ribonuclease, Rne/Rng family; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757. | Conserved hypothetical protein; Identified by similarity to SP:Q8XJP5. | 0.897 |
| DVU_3055 | DVU_1078 | DVU_3055 | DVU_1078 | Ribonuclease, Rne/Rng family; Identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757. | R3H domain protein; Identified by match to protein family HMM PF01424. | 0.914 |
