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DVU_1122 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1122" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1122annotation not available (494 aa)    
Predicted Functional Partners:
DVU_1120
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1417 (530 aa)
 
        0.948
DVU_1119
Virion morphogenesis protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641 (433 aa)
 
        0.946
DVU_1129
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1409 (122 aa)
 
        0.940
DVU_1118
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1420 (316 aa)
 
        0.911
DVU_2706
Uncharacterized protein; Identified by similarity to OMNI-NTL01NM01730; match to protein family HMM PF06074 (572 aa)
 
        0.878
DVU_2707
Virion morphogenesis protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641 (416 aa)
 
        0.876
DVU_1128
Lysozyme, putative; Identified by match to protein family HMM PF01464 (221 aa)
 
        0.869
DVU_2698
annotation not available (120 aa)
 
        0.863
DVU_1139
Bacteriophage DNA transposition B protein, putative; Identified by similarity to GP-974770 (245 aa)
 
          0.850
DVU_2713
annotation not available (143 aa)
 
        0.848
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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