STRINGSTRING
DVU_1129 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1129" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1129Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1409 (122 aa)    
Predicted Functional Partners:
DVU_1128
Lysozyme, putative; Identified by match to protein family HMM PF01464 (221 aa)
 
        0.967
DVU_1122
annotation not available (494 aa)
 
        0.940
DVU_1120
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1417 (530 aa)
 
        0.892
DVU_1119
Virion morphogenesis protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641 (433 aa)
 
        0.889
DVU_1118
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1420 (316 aa)
 
        0.874
DVU_1127
Uncharacterized protein; Identified by Glimmer2; putative (137 aa)
              0.849
DVU_1124
Uncharacterized protein; Identified by Glimmer2; putative (80 aa)
              0.849
DVU_1126
annotation not available (101 aa)
              0.849
DVU_1125
Conserved domain protein; Identified by similarity to GP-5531665 (157 aa)
              0.845
DVU_2706
Uncharacterized protein; Identified by similarity to OMNI-NTL01NM01730; match to protein family HMM PF06074 (572 aa)
 
        0.842
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (17%) [HD]