STRINGSTRING
DVU_1130 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1130" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1130annotation not available (154 aa)    
Predicted Functional Partners:
DVU_1132
Uncharacterized protein; Identified by similarity to OMNI-NMB0985 (169 aa)
              0.882
DVU_1131
Uncharacterized protein; Identified by Glimmer2; putative (121 aa)
              0.857
DVU_1133
Uncharacterized protein; Identified by Glimmer2; putative (152 aa)
              0.850
DVU_1129
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1409 (122 aa)
              0.625
DVU_1128
Lysozyme, putative; Identified by match to protein family HMM PF01464 (221 aa)
              0.625
DVU_1127
Uncharacterized protein; Identified by Glimmer2; putative (137 aa)
              0.625
DVU_1126
annotation not available (101 aa)
              0.625
DVU_1125
Conserved domain protein; Identified by similarity to GP-5531665 (157 aa)
              0.625
DVU_1124
Uncharacterized protein; Identified by Glimmer2; putative (80 aa)
              0.625
hupB
DNA-binding protein HU, beta subunit; Identified by similarity to SP-P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family (95 aa)
              0.608
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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