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DVU_1141 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1141" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
DVU_1141Uncharacterized protein; Identified by Glimmer2; putative (143 aa)    
Predicted Functional Partners:
DVU_1143
Uncharacterized protein; Identified by Glimmer2; putative (141 aa)
              0.665
DVU_1142
annotation not available (89 aa)
              0.665
DVU_1140
Bacteriophage transposase A protein, putative; Identified by similarity to SP-P07636 (717 aa)
              0.453
DVU_1139
Bacteriophage DNA transposition B protein, putative; Identified by similarity to GP-974770 (245 aa)
              0.453
DVU_1138
Uncharacterized protein; Identified by Glimmer2; putative (210 aa)
              0.453
DVU_1137
Uncharacterized protein; Identified by Glimmer2; putative (62 aa)
              0.453
DVU_1136
Host-nuclease inhibitor protein Gam, putative; Identified by similarity to SP-P06023 (170 aa)
              0.453
DVU_1135
Conserved domain protein; Identified by similarity to GP-14277814 (79 aa)
              0.436
hupB
DNA-binding protein HU, beta subunit; Identified by similarity to SP-P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family (95 aa)
              0.428
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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