Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
aorAldehyde:ferredoxin oxidoreductase, tungsten-containing; Identified by similarity to SP:Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730. (576 aa)    
Predicted Functional Partners:
DVU_0687
Aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative; Identified by similarity to SP:Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730.
  
  
 
0.929
DVU_0765
Hydroxypyruvate reductase, putative; Identified by similarity to SP:Q44472; match to protein family HMM PF05161.
     
  0.900
moeA
Molybdopterin biosynthesis MoeA protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.880
DVU_1597
Sulfite reductase, assimilatory-type; This enzyme catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate.
  
 
 0.812
DVU_3193
DNA-binding domain, excisionase family; Identified by match to protein family HMM TIGR01764.
 
   
 0.772
DVU_1180
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.770
DVU_0643
thiF protein, putative; Identified by similarity to SP:P30138; match to protein family HMM PF00899.
 
   
 0.759
DVU_0978
ABC transporter, periplasmic substrate-binding protein, putative; Identified by similarity to GP:14330288.
 
   
 0.756
DVU_0745
ABC transporter, periplasmic substrate-binding protein; Identified by similarity to GP:14330288; match to protein family HMM PF01547.
 
   
 0.753
DVU_0951
Molybdopterin biosynthesis MoeA protein, putative; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.744
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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