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DVU_1215 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1215" - Identified by match to protein family HMM PF01569 in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1215Identified by match to protein family HMM PF01569 (218 aa)    
Predicted Functional Partners:
DVU_1214
Identified by match to protein family HMM PF02366 (667 aa)
 
     
  0.768
DVU_1216
Uncharacterized protein; Identified by Glimmer2; putative (74 aa)
              0.647
DVU_3239
Identified by match to protein family HMM PF01569 (221 aa)
   
          0.590
DVU_0635
Identified by match to protein family HMM PF02366 (528 aa)
 
     
  0.522
DVU_0861
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (372 aa)
 
        0.499
DVU_0038
Acyltransferase domain protein; Identified by match to protein family HMM PF01553 (616 aa)
   
   
  0.431
DVU_1177
Uncharacterized protein; Identified by Glimmer2; putative (220 aa)
   
          0.401
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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