Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1214 | DVU_1215 | DVU_1214 | DVU_1215 | Identified by match to protein family HMM PF02366. | Identified by match to protein family HMM PF01569. | 0.780 |
| DVU_1214 | DVU_2352 | DVU_1214 | DVU_2352 | Identified by match to protein family HMM PF02366. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.489 |
| DVU_1214 | DVU_2992 | DVU_1214 | DVU_2992 | Identified by match to protein family HMM PF02366. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.481 |
| DVU_1214 | DVU_3287 | DVU_1214 | DVU_3287 | Identified by match to protein family HMM PF02366. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.508 |
| DVU_1215 | DVU_1214 | DVU_1215 | DVU_1214 | Identified by match to protein family HMM PF01569. | Identified by match to protein family HMM PF02366. | 0.780 |
| DVU_1215 | DVU_1216 | DVU_1215 | DVU_1216 | Identified by match to protein family HMM PF01569. | Hypothetical protein; Identified by Glimmer2; putative. | 0.594 |
| DVU_1215 | DVU_2352 | DVU_1215 | DVU_2352 | Identified by match to protein family HMM PF01569. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.511 |
| DVU_1215 | DVU_2992 | DVU_1215 | DVU_2992 | Identified by match to protein family HMM PF01569. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.599 |
| DVU_1215 | DVU_3065 | DVU_1215 | DVU_3065 | Identified by match to protein family HMM PF01569. | Identified by match to protein family HMM PF00501. | 0.633 |
| DVU_1215 | DVU_3287 | DVU_1215 | DVU_3287 | Identified by match to protein family HMM PF01569. | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.631 |
| DVU_1215 | fadD | DVU_1215 | DVU_1453 | Identified by match to protein family HMM PF01569. | long-chain-fatty-acid--CoA ligase; Identified by similarity to SP:P94547; match to protein family HMM PF00501. | 0.633 |
| DVU_1215 | rplF | DVU_1215 | DVU_1318 | Identified by match to protein family HMM PF01569. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.658 |
| DVU_1215 | rpoZ | DVU_1215 | DVU_3242 | Identified by match to protein family HMM PF01569. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.635 |
| DVU_1215 | uppP | DVU_1215 | DVU_1660 | Identified by match to protein family HMM PF01569. | Undecaprenol kinase, putative; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.555 |
| DVU_1216 | DVU_1215 | DVU_1216 | DVU_1215 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF01569. | 0.594 |
| DVU_2352 | DVU_1214 | DVU_2352 | DVU_1214 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF02366. | 0.489 |
| DVU_2352 | DVU_1215 | DVU_2352 | DVU_1215 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF01569. | 0.511 |
| DVU_2992 | DVU_1214 | DVU_2992 | DVU_1214 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF02366. | 0.481 |
| DVU_2992 | DVU_1215 | DVU_2992 | DVU_1215 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Identified by match to protein family HMM PF01569. | 0.599 |
| DVU_3065 | DVU_1215 | DVU_3065 | DVU_1215 | Identified by match to protein family HMM PF00501. | Identified by match to protein family HMM PF01569. | 0.633 |
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