STRINGSTRING
DVU_1223 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1223" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1223Uncharacterized protein; Identified by similarity to SP-O27068; match to protein family HMM PF02624 (425 aa)    
Predicted Functional Partners:
DVU_0843
Uncharacterized protein; Identified by Glimmer2; putative (394 aa)
 
          0.693
DVU_2791
annotation not available (259 aa)
   
          0.684
DVU_1537
Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)
   
          0.684
DVU_2899
Uncharacterized protein; Identified by Glimmer2; putative (286 aa)
   
          0.672
DVU_0297
Uncharacterized protein; Identified by Glimmer2; putative (115 aa)
   
          0.654
DVU_1692
Uncharacterized protein; Identified by Glimmer2; putative (131 aa)
   
          0.597
DVU_1252
annotation not available (758 aa)
   
          0.587
DVU_2415
Diadenylate cyclase; Identified by Glimmer2; putative (575 aa)
   
          0.561
DVU_1176
Uncharacterized protein; Identified by Glimmer2; putative (185 aa)
   
          0.555
DVU_0455
Uncharacterized protein; Identified by Glimmer2; putative (255 aa)
 
          0.550
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (13%) [HD]