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DVU_1243 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1243" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1243Uncharacterized protein; Identified by similarity to GP-22799047 (210 aa)    
Predicted Functional Partners:
DVU_1244
Uncharacterized protein; Identified by similarity to OMNI-NTL01RS2960; match to protein family HMM PF02470 (148 aa)
 
  0.998
DVU_1242
VacJ lipoprotein, putative; Identified by similarity to SP-P76506; match to protein family HMM PF04333 (273 aa)
 
 
  0.986
DVU_1246
Membrane protein, putative; Identified by similarity to OMNI-NTL01AA00252; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (267 aa)
 
 
  0.955
DVU_1245
ABC transporter, ATP-binding protein; Identified by similarity to SP-P45393; match to protein family HMM PF00005 (274 aa)
 
 
  0.952
DVU_0610
Uncharacterized protein; Identified by similarity to OMNI-NTL03PA03213; match to protein family HMM PF02470 (306 aa)
   
  0.936
DVU_0612
STAS domain protein; Identified by similarity to GP-9106294; match to protein family HMM PF01740; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (406 aa)
   
 
  0.846
DVU_0611
ABC transporter, ATP-binding protein; Identified by similarity to GP-21109946; match to protein family HMM PF00005 (275 aa)
   
 
  0.846
DVU_3158
VacJ lipoprotein, putative; Identified by match to protein family HMM PF04333 (295 aa)
 
 
  0.836
DVU_1668
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (225 aa)
   
        0.715
pqiB
Paraquat-inducible protein B; Identified by similarity to SP-P43671 (543 aa)
   
 
  0.695
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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