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DVU_1244 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1244" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1244Uncharacterized protein; Identified by similarity to OMNI-NTL01RS2960; match to protein family HMM PF02470 (148 aa)    
Predicted Functional Partners:
DVU_1243
Uncharacterized protein; Identified by similarity to GP-22799047 (210 aa)
 
  0.998
DVU_1246
Membrane protein, putative; Identified by similarity to OMNI-NTL01AA00252; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (267 aa)
 
  0.995
DVU_1245
ABC transporter, ATP-binding protein; Identified by similarity to SP-P45393; match to protein family HMM PF00005 (274 aa)
 
  0.981
DVU_0612
STAS domain protein; Identified by similarity to GP-9106294; match to protein family HMM PF01740; match to protein family HMM PF02405; match to protein family HMM TIGR00056 (406 aa)
 
  0.965
DVU_1242
VacJ lipoprotein, putative; Identified by similarity to SP-P76506; match to protein family HMM PF04333 (273 aa)
 
     
  0.960
DVU_0611
ABC transporter, ATP-binding protein; Identified by similarity to GP-21109946; match to protein family HMM PF00005 (275 aa)
 
  0.893
DVU_0610
Uncharacterized protein; Identified by similarity to OMNI-NTL03PA03213; match to protein family HMM PF02470 (306 aa)
         
    0.800
DVU_3158
VacJ lipoprotein, putative; Identified by match to protein family HMM PF04333 (295 aa)
 
     
  0.642
DVU_2375
Lipoprotein releasing system, permease protein; Identified by similarity to SP-P75956; match to protein family HMM PF02687 (411 aa)
   
        0.607
DVU_2439
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (411 aa)
     
        0.581
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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