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DVU_1338 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1338" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1338Uncharacterized protein; Identified by similarity to OMNI-SO3257 (194 aa)    
Predicted Functional Partners:
DVU_1339
annotation not available (276 aa)
 
          0.853
DVU_0858
annotation not available (227 aa)
   
          0.739
DVU_2436
Uncharacterized protein; Identified by similarity to OMNI-AF1432 (210 aa)
           
  0.727
DVU_1682
GAF domain protein; Identified by match to protein family HMM PF01590 (344 aa)
   
          0.670
DVU_1955
TPR domain protein; Identified by match to protein family HMM PF00515 (277 aa)
   
          0.664
DVU_0760
Uncharacterized protein; Identified by Glimmer2; putative (376 aa)
   
          0.664
DVU_2971
Glycosyl transferase, family 8; Identified by match to protein family HMM PF01501 (303 aa)
   
          0.644
DVU_3172
Uncharacterized protein; Identified by Glimmer2; putative (715 aa)
   
          0.639
DVU_2937
TPR domain protein/response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00515 (451 aa)
   
   
  0.629
DVU_0045
annotation not available (173 aa)
   
          0.624
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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