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DVU_1340 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1340" - annotation not available in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
DVU_1340annotation not available (164 aa)    
Predicted Functional Partners:
DVU_1342
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to SP-Q9XDA6; match to protein family HMM PF00005 (268 aa)
   
   
  0.880
DVU_1343
Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297 (335 aa)
         
  0.867
DVU_1341
Cation ABC transporter, permease protein; Identified by similarity to GP-5019735; match to protein family HMM PF00950 (274 aa)
         
  0.866
DVU_1347
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551 (304 aa)
         
  0.687
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (330 aa)
         
  0.547
DVU_0434
Ech hydrogenase, subunit EchA, putative; Identified by similarity to GP-3005967; match to protein family HMM PF00361 (648 aa)
         
  0.540
DVU_0281
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397 (479 aa)
           
  0.537
DVU_2681
Uncharacterized protein; Identified by Glimmer2; putative (60 aa)
           
  0.531
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
         
  0.526
gap-1
Glyceraldehyde-3-phosphate dehydrogenase; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (338 aa)
           
  0.514
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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