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DVU_1352 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1352" - 6-carboxy-5,6,7,8-tetrahydropterin synthase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_13526-carboxy-5,6,7,8-tetrahydropterin synthase; Identified by match to protein family HMM PF01242 (129 aa)    
Predicted Functional Partners:
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (216 aa)
 
   
  0.932
DVU_2657
6-carboxy-5,6,7,8-tetrahydropterin synthase; Identified by match to protein family HMM PF01242 (120 aa)
   
   
 
0.922
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate (264 aa)
       
  0.920
dnaE
DNA-directed DNA polymerase; Identified by similarity to SP-P10443; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594 (1164 aa)
              0.886
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (528 aa)
         
  0.746
hom
Homoserine dehydrogenase; Identified by similarity to SP-P19582; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 (424 aa)
         
  0.568
DVU_1351
UPF0056 inner membrane protein; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427 (200 aa)
              0.563
DVU_1354
Uncharacterized protein; Identified by Glimmer2; putative (85 aa)
              0.530
DVU_1356
HD domain protein; Identified by match to protein family HMM PF01966 (267 aa)
              0.503
DVU_1357
Conserved domain protein; Identified by similarity to OMNI-NTL01TT0547 (208 aa)
              0.488
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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