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DVU_1392 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1392" - Identified by match to protein family HMM PF00877 in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1392Identified by match to protein family HMM PF00877 (265 aa)    
Predicted Functional Partners:
DVU_1391
Uncharacterized protein; Identified by Glimmer2; putative (125 aa)
              0.845
DVU_1395
C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258 (73 aa)
              0.694
DVU_1394
Uncharacterized protein; Identified by Glimmer2; putative (52 aa)
              0.694
DVU_1393
Uncharacterized protein; Identified by Glimmer2; putative (67 aa)
              0.694
DVU_1264
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464 (253 aa)
 
 
  0.566
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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