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bfr protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"bfr" - Bacterioferritin in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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bfrBacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (179 aa)    
Predicted Functional Partners:
DVU_0665
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (281 aa)
     
 
  0.843
DVU_1396
Uncharacterized protein; Identified by similarity to OMNI-NTL02MT00799 (85 aa)
              0.643
rub
Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule (52 aa)
         
  0.618
DVU_0434
Ech hydrogenase, subunit EchA, putative; Identified by similarity to GP-3005967; match to protein family HMM PF00361 (648 aa)
   
   
  0.570
rr
Rubrerythrin; May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide (191 aa)
         
  0.562
ribAB
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (409 aa)
     
   
  0.541
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
           
  0.538
DVU_1347
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551 (304 aa)
           
  0.530
DVU_0281
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397 (479 aa)
           
  0.530
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (486 aa)
           
  0.509
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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