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DVU_1446 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1446" - Identified by match to protein family HMM PF01075 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1446Identified by match to protein family HMM PF01075 (467 aa)    
Predicted Functional Partners:
DVU_1447
annotation not available (569 aa)
 
        0.966
DVU_1448
Uncharacterized protein; Identified by similarity to OMNI-TM0735; match to protein family HMM PF03961 (378 aa)
 
          0.888
dtd
D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl- tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality; Belongs to the DTD family (162 aa)
              0.847
DVU_1445
Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120 (531 aa)
 
          0.846
DVU_1451
Response regulator; Identified by match to protein family HMM PF00072 (389 aa)
              0.842
fadD
Long-chain-fatty-acid--CoA ligase; Identified by similarity to SP-P94547; match to protein family HMM PF00501 (564 aa)
   
        0.795
DVU_1449
Anti-sigma factor antagonist; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family (114 aa)
              0.795
DVU_1450
Anti-sigma factor, putative; Identified by similarity to SP-P70878; match to protein family HMM PF02518 (146 aa)
              0.792
DVU_2261
Uncharacterized protein; Identified by Glimmer2; putative (604 aa)
 
        0.760
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
 
          0.715
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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