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fadD protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"fadD" - Long-chain-fatty-acid--CoA ligase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
Experiments
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[Homology]
Score
fadDLong-chain-fatty-acid--CoA ligase; Identified by similarity to SP-P94547; match to protein family HMM PF00501 (564 aa)    
Predicted Functional Partners:
DVU_3119
Identified by match to protein family HMM PF00501 (564 aa)
 
 
0.913
dtd
D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl- tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality; Belongs to the DTD family (162 aa)
              0.883
DVU_1450
Anti-sigma factor, putative; Identified by similarity to SP-P70878; match to protein family HMM PF02518 (146 aa)
   
   
  0.853
DVU_1451
Response regulator; Identified by match to protein family HMM PF00072 (389 aa)
   
   
  0.852
DVU_1449
Anti-sigma factor antagonist; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family (114 aa)
   
        0.849
DVU_1446
Identified by match to protein family HMM PF01075 (467 aa)
   
        0.795
DVU_1448
Uncharacterized protein; Identified by similarity to OMNI-TM0735; match to protein family HMM PF03961 (378 aa)
              0.792
DVU_1447
annotation not available (569 aa)
              0.792
sucCD
Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (709 aa)
 
   
  0.764
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1006 aa)
   
 
  0.593
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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