STRINGSTRING
DVU_1464 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1464" - Identified by match to protein family HMM PF01075 in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1464Identified by match to protein family HMM PF01075 (411 aa)    
Predicted Functional Partners:
DVU_1465
annotation not available (354 aa)
 
      0.937
DVU_2261
Uncharacterized protein; Identified by Glimmer2; putative (604 aa)
 
        0.796
DVU_1458
Chemotaxis protein CheZ, putative; Identified by similarity to SP-P07800 (238 aa)
 
          0.794
DVU_1447
annotation not available (569 aa)
 
        0.790
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
 
          0.781
DVU_0518
Uncharacterized protein; Identified by Glimmer2; putative (154 aa)
   
          0.781
DVU_3225
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.779
DVU_1032
Uncharacterized protein; Identified by Glimmer2; putative (169 aa)
   
          0.779
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515 (1076 aa)
   
     
  0.778
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515 (285 aa)
   
          0.778
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (28%) [HD]