STRINGSTRING
DVU_1465 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1465" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1465annotation not available (354 aa)    
Predicted Functional Partners:
DVU_1464
Identified by match to protein family HMM PF01075 (411 aa)
 
      0.937
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
 
          0.783
DVU_2261
Uncharacterized protein; Identified by Glimmer2; putative (604 aa)
   
          0.779
DVU_0756
TPR domain protein; Identified by match to protein family HMM PF00515 (237 aa)
   
          0.768
DVU_0902
TPR domain protein; Identified by match to protein family HMM PF00515 (285 aa)
   
          0.767
DVU_3225
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.764
DVU_0524
Uncharacterized protein; Identified by Glimmer2; putative (138 aa)
   
          0.763
DVU_1032
Uncharacterized protein; Identified by Glimmer2; putative (169 aa)
   
          0.759
DVU_0518
Uncharacterized protein; Identified by Glimmer2; putative (154 aa)
   
          0.758
DVU_1458
Chemotaxis protein CheZ, putative; Identified by similarity to SP-P07800 (238 aa)
 
          0.758
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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