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ppiC protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"ppiC" - Peptidylprolyl isomerase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ppiCPeptidylprolyl isomerase; Identified by similarity to SP-P39159; match to protein family HMM PF00639 (94 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.657
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (791 aa)
   
 
  0.612
DVU_1469
Ribosomal protein S1, putative; Identified by similarity to SP-P02349; match to protein family HMM PF00575 (487 aa)
     
      0.601
fba
Fructose-1,6-bisphosphate aldolase, class II; Identified by similarity to SP-P13243; match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859 (307 aa)
   
   
  0.556
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (139 aa)
   
 
  0.537
DVU_1471
Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family (122 aa)
              0.528
DVU_1472
Endopeptidase La; Identified by match to protein family HMM PF05362 (815 aa)
              0.509
ppiB-2
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (164 aa)
     
 
  0.492
ppiB-1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (164 aa)
     
 
  0.492
DVU_1468
Periplasmic serine endoprotease DegP-like; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; Belongs to the peptidase S1C family (482 aa)
   
 
  0.489
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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