STRINGSTRING
DVU_1486 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1486" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1486annotation not available (770 aa)    
Predicted Functional Partners:
DVU_1485
Uncharacterized protein; Identified by Glimmer2; putative (211 aa)
              0.848
DVU_1484
Uncharacterized protein; Identified by Glimmer2; putative (112 aa)
              0.847
DVU_1483
annotation not available (169 aa)
              0.845
DVU_1490
annotation not available (932 aa)
 
        0.820
DVU_1482
Uncharacterized protein; Identified by Glimmer2; putative (96 aa)
              0.761
DVU_1481
Nuclease domain protein; Identified by match to protein family HMM PF00565 (269 aa)
              0.761
DVU_1545
Hemolysin-type calcium-binding repeat/calx-beta domain protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF03160; match to protein family HMM TIGR01612 (2414 aa)
 
          0.760
DVU_1266
Uncharacterized protein; Identified by Glimmer2; putative (1145 aa)
   
          0.756
DVU_2898
Uncharacterized protein; Identified by similarity to OMNI-NTL01MM1125 (333 aa)
   
          0.744
DVU_3165
Conserved domain protein; Identified by similarity to GP-19886751 (286 aa)
   
          0.725
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (13%) [HD]