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DVU_1493 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1493" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1493Uncharacterized protein; Identified by Glimmer2; putative (127 aa)    
Predicted Functional Partners:
DVU_1494
Uncharacterized protein; Identified by Glimmer2; putative (387 aa)
              0.845
DVU_1495
Uncharacterized protein; Identified by Glimmer2; putative (114 aa)
              0.837
DVU_1492
Uncharacterized protein; Identified by Glimmer2; putative (193 aa)
              0.727
DVU_1499
Uncharacterized protein; Identified by Glimmer2; putative (89 aa)
              0.693
DVU_1498
Uncharacterized protein; Identified by similarity to GP-17484030 (185 aa)
              0.693
DVU_1497
Head-tail adaptor, putative; Identified by match to protein family HMM TIGR01563 (108 aa)
              0.693
DVU_1496
Uncharacterized protein; Identified by Glimmer2; putative (165 aa)
              0.693
DVU_1500
Major capsid protein, HK97 family; Identified by match to protein family HMM TIGR01554 (398 aa)
              0.577
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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