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DVU_1498 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1498" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1498Uncharacterized protein; Identified by similarity to GP-17484030 (185 aa)    
Predicted Functional Partners:
DVU_1497
Head-tail adaptor, putative; Identified by match to protein family HMM TIGR01563 (108 aa)
 
          0.967
DVU_1500
Major capsid protein, HK97 family; Identified by match to protein family HMM TIGR01554 (398 aa)
 
          0.904
DVU_1499
Uncharacterized protein; Identified by Glimmer2; putative (89 aa)
              0.845
DVU_1496
Uncharacterized protein; Identified by Glimmer2; putative (165 aa)
              0.845
DVU_1502
Portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537 (419 aa)
 
          0.821
DVU_1503
Terminase, large subunit; Identified by match to protein family HMM PF03354 (565 aa)
 
          0.810
DVU_1504
Terminase, small subunit; Identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558 (155 aa)
 
          0.793
DVU_1505
Holin, putative; Identified by match to protein family HMM PF01844 (132 aa)
 
          0.785
DVU_1495
Uncharacterized protein; Identified by Glimmer2; putative (114 aa)
              0.700
DVU_1494
Uncharacterized protein; Identified by Glimmer2; putative (387 aa)
              0.693
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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