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DVU_1512 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1512" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1512Uncharacterized protein; Identified by Glimmer2; putative (86 aa)    
Predicted Functional Partners:
DVU_1513
Uncharacterized protein; Identified by similarity to GP-21202981 (164 aa)
              0.845
DVU_1511
Uncharacterized protein; Identified by Glimmer2; putative (76 aa)
              0.845
DVU_1510
Uncharacterized protein; Identified by Glimmer2; putative (187 aa)
              0.562
DVU_1509
Uncharacterized protein; Identified by similarity to GP-21913207 (129 aa)
              0.562
DVU_1515
Cytosine-specific methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675 (487 aa)
              0.494
DVU_1514
Uncharacterized protein; Identified by Glimmer2; putative (405 aa)
              0.494
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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