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DVU_1536 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1536" - Transglycosylase, SLT family in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1536Transglycosylase, SLT family; Identified by match to protein family HMM PF01464 (378 aa)    
Predicted Functional Partners:
DVU_1537
Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)
         
  0.548
DVU_1535
Membrane protein, putative; Identified by similarity to OMNI-NTL01TT0071 (173 aa)
              0.538
DVU_1534
Membrane protein, putative; Identified by similarity to OMNI-NTL01TV0482; match to protein family HMM PF04143 (170 aa)
              0.538
DVU_3205
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464 (481 aa)
   
   
  0.453
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.419
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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