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DVU_1537 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1537" - Lipoprotein, putative in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1537Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)    
Predicted Functional Partners:
DVU_0843
Uncharacterized protein; Identified by Glimmer2; putative (394 aa)
   
        0.769
DVU_0797
Uncharacterized protein; Identified by similarity to GP-21899254 (476 aa)
   
          0.764
DVU_1843
Uncharacterized protein; Identified by Glimmer2; putative (317 aa)
   
          0.762
DVU_0273
Uncharacterized protein; Identified by similarity to GP-21899254 (505 aa)
   
          0.760
DVU_2899
Uncharacterized protein; Identified by Glimmer2; putative (286 aa)
   
     
  0.754
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.754
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
   
          0.746
DVU_1252
annotation not available (758 aa)
   
          0.746
DVU_0371
Uncharacterized protein; Identified by similarity to GP-21899254 (474 aa)
   
          0.744
DVU_0810
Uncharacterized protein; Identified by Glimmer2; putative (686 aa)
   
          0.740
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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