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DVU_1578 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1578" - TPR domain protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_1578TPR domain protein; Identified by match to protein family HMM PF01435 (481 aa)    
Predicted Functional Partners:
DVU_1584
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (356 aa)
 
        0.888
DVU_1583
TPR domain protein; Identified by match to protein family HMM PF00515 (562 aa)
 
   
  0.864
cysS
Cysteine--tRNA ligase; Identified by similarity to SP-Q06752; match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family (485 aa)
              0.857
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
 
          0.843
DVU_1580
Ribose 5-phosphate isomerase, putative; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120 (147 aa)
              0.823
DVU_1581
Uncharacterized protein; Identified by Glimmer2; putative (116 aa)
              0.793
hslV
ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery (181 aa)
              0.637
DVU_1668
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (225 aa)
 
        0.631
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (791 aa)
   
   
  0.628
DVU_1587
Acetyltransferase, GNAT family; Identified by similarity to SP-P08205; match to protein family HMM PF00583 (154 aa)
   
        0.627
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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