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DVU_1582 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1582" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1582Uncharacterized protein; Identified by Glimmer2; putative (279 aa)    
Predicted Functional Partners:
DVU_1583
TPR domain protein; Identified by match to protein family HMM PF00515 (562 aa)
 
          0.925
DVU_1584
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (356 aa)
              0.868
DVU_1580
Ribose 5-phosphate isomerase, putative; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120 (147 aa)
              0.855
DVU_1578
TPR domain protein; Identified by match to protein family HMM PF01435 (481 aa)
 
          0.843
DVU_1589
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
 
          0.827
DVU_1581
Uncharacterized protein; Identified by Glimmer2; putative (116 aa)
              0.821
DVU_1842
annotation not available (318 aa)
   
          0.784
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.784
DVU_0371
Uncharacterized protein; Identified by similarity to GP-21899254 (474 aa)
   
          0.784
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
   
          0.783
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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