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DVU_1589 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1589" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1589Uncharacterized protein; Identified by Glimmer2; putative (262 aa)    
Predicted Functional Partners:
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (456 aa)
              0.834
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
 
          0.827
DVU_2459
Uncharacterized protein; Identified by Glimmer2; putative (149 aa)
   
          0.780
DVU_3190
Uncharacterized protein; Identified by Glimmer2; putative (555 aa)
   
          0.778
DVU_1194
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
   
          0.772
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative (491 aa)
   
          0.772
DVU_1875
DafA protein; Identified by similarity to SP-P77527 (105 aa)
   
          0.771
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
   
          0.771
DVU_1683
Uncharacterized protein; Identified by Glimmer2; putative (578 aa)
   
          0.770
DVU_0602
Uncharacterized protein; Identified by Glimmer2; putative (120 aa)
   
          0.770
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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